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E

EDAMOntology - Class in org.sbolstandard.core2

This class provides methods for accessing EMBRACE Data and Methods (EDAM) terms and querying about their relationships.

EDAMOntology() - Constructor for class org.sbolstandard.core2.EDAMOntology

Construct an EDAM ontology object and read the OBO definition file, if necessary.

EFFECTOR - Static variable in class org.sbolstandard.core2.ComponentDefinition

A small molecule which increases (activator) or decreases (inhibitor) the activity of an (allosteric) enzyme by binding to the enzyme at the regulatory site (which is different from the substrate-binding catalytic site) (Effector).

ENCAPSULATING_PROCESS - Static variable in class org.sbolstandard.core2.SystemsBiologyOntology

An aggregation of interactions and entities into a single process (SBO:0000395).

ENGINEERED_GENE - Static variable in class org.sbolstandard.core2.SequenceOntology

A gene that is engineered (SO:0000280).

ENGINEERED_REGION - Static variable in class org.sbolstandard.core2.SequenceOntology

A region that is engineered (SO:0000804).

ENZYMATIC_CATALYST - Static variable in class org.sbolstandard.core2.SystemsBiologyOntology

A substance that accelerates the velocity of a chemical reaction without itself being consumed or transformed, by lowering the free energy of the transition state (SBO:0000460).

equals(Object) - Method in class org.sbolstandard.core2.Activity

equals(Object) - Method in class org.sbolstandard.core2.Annotation

equals(Object) - Method in class org.sbolstandard.core2.Association

equals(Object) - Method in class org.sbolstandard.core2.Attachment

equals(Object) - Method in class org.sbolstandard.core2.Collection

equals(Object) - Method in class org.sbolstandard.core2.CombinatorialDerivation

equals(Object) - Method in class org.sbolstandard.core2.Component

equals(Object) - Method in class org.sbolstandard.core2.ComponentDefinition

equals(Object) - Method in class org.sbolstandard.core2.ComponentInstance

equals(Object) - Method in class org.sbolstandard.core2.Cut

equals(Object) - Method in class org.sbolstandard.core2.Experiment

equals(Object) - Method in class org.sbolstandard.core2.ExperimentalData

equals(Object) - Method in class org.sbolstandard.core2.FunctionalComponent

equals(Object) - Method in class org.sbolstandard.core2.GenericLocation

equals(Object) - Method in class org.sbolstandard.core2.GenericTopLevel

equals(Object) - Method in class org.sbolstandard.core2.Identified

equals(Object) - Method in class org.sbolstandard.core2.Implementation

equals(Object) - Method in class org.sbolstandard.core2.Interaction

equals(Object) - Method in class org.sbolstandard.core2.MapsTo

equals(Object) - Method in class org.sbolstandard.core2.Measure

equals(Object) - Method in class org.sbolstandard.core2.Measured

equals(Object) - Method in class org.sbolstandard.core2.Model

equals(Object) - Method in class org.sbolstandard.core2.Module

equals(Object) - Method in class org.sbolstandard.core2.ModuleDefinition

equals(Object) - Method in class org.sbolstandard.core2.Participation

equals(Object) - Method in class org.sbolstandard.core2.Range

equals(Object) - Method in class org.sbolstandard.core2.SBOLDocument

equals(Object) - Method in class org.sbolstandard.core2.Sequence

equals(Object) - Method in class org.sbolstandard.core2.SequenceAnnotation

equals(Object) - Method in class org.sbolstandard.core2.SequenceConstraint

equals(Object) - Method in class org.sbolstandard.core2.TopLevel

equals(Object) - Method in class org.sbolstandard.core2.Usage

EQUIVALENCE - Static variable in class org.sbolstandard.core2.SystemsBiologyOntology

Term to signify those material or conceptual entities that are identical in some respect within a frame of reference (SBO:0000392).

ESSENTIAL_ACTIVATOR - Static variable in class org.sbolstandard.core2.SystemsBiologyOntology

A substance that is absolutely required for occurrence and stimulation of a reaction (SBO:0000461).

Experiment - Class in org.sbolstandard.core2

Represents an Collection object in the SBOL data model.

EXPERIMENT - Static variable in class org.sbolstandard.core2.TopLevel

The abbreviation for the Experiment type in URI

EXPERIMENTAL_DATA - Static variable in class org.sbolstandard.core2.TopLevel

The abbreviation for the Experimental_DATA type in URI

ExperimentalData - Class in org.sbolstandard.core2

Represents an Collection object in the SBOL data model.

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