| Package | Description |
|---|---|
| org.sbolstandard.core2 | |
| org.synbiohub.frontend |
| Class and Description |
|---|
| AccessType
Represents all access types for a
ComponentInstance object. |
| Activity
Represents a Activity object in the SBOL data model.
|
| ActivityRoleType
Represents the roles used in Associations and Usages in Activities for Design-Build-Test-Learn workflow.
|
| Agent
Represents an Agent object in the SBOL data model.
|
| Annotation
Represents an Annotation object in the cSBOL data model.
|
| Association
Represents an Association object in the SBOL data model.
|
| Attachment
Represents a Attachment object in the SBOL data model.
|
| Collection
Represents an Collection object in the SBOL data model.
|
| CombinatorialDerivation
Represents a CombinatorialDerivation object in the SBOL data model.
|
| Component
Represents a Component object in the SBOL data model.
|
| ComponentDefinition
Represents a ComponentDefinition object in the SBOL data model.
|
| ComponentInstance
Represents a ComponentInstance object in the SBOL data model.
|
| Cut
Represents the Cut extension of the SBOL Location class.
|
| DirectionType
Represents all direction types for a
FunctionalComponent object. |
| Experiment
Represents an Collection object in the SBOL data model.
|
| ExperimentalData
Represents an Collection object in the SBOL data model.
|
| FunctionalComponent
Represents a FunctionalComponent object in the SBOL data model.
|
| GenericLocation
Represents a GenericLocation extension object of the SBOL Location class.
|
| GenericTopLevel
Represents a GenericTopLevel object in the SBOL data model.
|
| Identified
Represents an Identified object in the SBOL data model.
|
| Implementation
Represents an Implementation object in the SBOL data model.
|
| Interaction
Represents an Interaction object in the SOBL data model.
|
| Location
Represents a Location object in the SOBL data model.
|
| MapsTo
Represents a MapsTo object in the SBOL data model.
|
| Measure
Represents an Measure object in the SBOL data model.
|
| Measured
Represents a Measured object in the SBOL data model.
|
| Model
Represents a Model object in the SBOL data model.
|
| Module
Represents a Module object in the SBOL data model.
|
| ModuleDefinition
Represents a ModuleDefinition object in the SBOL data model.
|
| OperatorType
Represents all operator types for a
VariableComponent object. |
| OrientationType
Represents the orientation type for extended classes of the Location class.
|
| Participation
Represents a Participation object in the SBOL data model.
|
| Plan
Represents an Plan object in the SBOL data model.
|
| Range
Represents a Range extension object of the SBOL Location class.
|
| RefinementType
Represents the refinement relationship between a MapsTo instance's local and remote components.
|
| RestrictionType
Represents the relationship between a sequence constraint's subject and object components.
|
| RoleIntegrationType
Represents the role integration relationship between roles specified in related objects.
|
| SBOLConversionException
Signals that an exception related to conversion between SBOL and other file formats has occurred.
|
| SBOLDocument
Represents the SBOL document where all top-level instances can be created and
manipulated.
|
| SBOLValidationException
Signals that an SBOL validation rule violation has occurred.
|
| Sequence
Represents a Sequence object in the SBOL data model.
|
| SequenceAnnotation
Represents a SequenceAnnotation object in the SBOL data model.
|
| SequenceConstraint
Represents a SequenceConstraint object in the SBOL data model.
|
| StrategyType
Represents all strategy types for a
CombinatorialDerivation object. |
| TopLevel
Represents a TopLevel object in the SBOL data model.
|
| Usage
Represents an Usage object in the SBOL data model.
|
| VariableComponent
Represents a VariableComponent in the SBOL data model
|
| Class and Description |
|---|
| SBOLDocument
Represents the SBOL document where all top-level instances can be created and
manipulated.
|