Uses of Class
org.sbolstandard.core2.Sequence

Packages that use Sequence

Package	Description
org.sbolstandard.core2

Uses of Sequence in org.sbolstandard.core2

Methods in org.sbolstandard.core2 that return Sequence

Modifier and Type	Method and Description
Sequence	SBOLDocument.createSequence(String URIprefix, String displayId, String version, String elements, URI encoding) Creates a Sequence instance with the given arguments, and then adds it to this SBOLDocument object's list of Sequence instances.
Sequence	SBOLDocument.createSequence(String displayId, String version, String elements, URI encoding) Creates a Sequence instance with this SBOL document's defaultURIprefix and the given arguments, and then adds it to this SBOL document's list of Sequence instances.
Sequence	SBOLDocument.createSequence(String displayId, String elements, URI encoding) Creates a Sequence instance with this SBOL document's defaultURIprefix, the given arguments, and an empty version string, and then adds it to this SBOL document's list of Sequence instances.
Sequence	Location.getSequence() Returns the sequence referenced by this location.
Sequence	SBOLDocument.getSequence(String displayId, String version) Returns the sequence matching the given display ID and version from this SBOL document's list of sequences.
Sequence	SBOLDocument.getSequence(URI sequenceURI) Returns the sequence matching the given modelURI from this SBOL document's list of sequences.
Sequence	ComponentDefinition.getSequenceByEncoding(URI encoding) Returns the first sequence referenced by this component definition that matches the given sequence encoding.

Methods in org.sbolstandard.core2 that return types with arguments of type Sequence

Modifier and Type	Method and Description
Set<Sequence>	SBOLDocument.getSequences() Returns the set of sequences owned by this SBOL document.
Set<Sequence>	ComponentDefinition.getSequences() Returns the set of sequences referenced by this component definition.

Methods in org.sbolstandard.core2 with parameters of type Sequence

Modifier and Type	Method and Description
boolean	ComponentDefinition.addSequence(Sequence sequence) Adds the URI of the given Sequence instance to this component definition's set of sequence URIs.
boolean	SBOLDocument.removeSequence(Sequence sequence) Removes the given sequence from this SBOL document's list of sequences.