Package | Description |
---|---|
org.sbolstandard.core2 |
Modifier and Type | Method and Description |
---|---|
ComponentDefinition |
SBOLDocument.createComponentDefinition(String displayId,
Set<URI> types)
Creates a component definition, and then adds it to this SBOL document's list
of component definitions.
|
ComponentDefinition |
SBOLDocument.createComponentDefinition(String displayId,
String version,
Set<URI> types)
Creates a component definition, and then adds it to this SBOL document's list
of component definitions.
|
ComponentDefinition |
SBOLDocument.createComponentDefinition(String URIprefix,
String displayId,
String version,
Set<URI> types)
Creates a component definition, and then adds it to this SBOL document's list
of component definitions.
|
ComponentDefinition |
SBOLDocument.createComponentDefinition(String URIprefix,
String displayId,
String version,
URI type)
Creates a component definition, and then adds it to this SBOL document's list
of component definitions.
|
ComponentDefinition |
SBOLDocument.createComponentDefinition(String displayId,
String version,
URI type)
Creates a component definition, and then adds it to this SBOL document's list
of component definitions.
|
ComponentDefinition |
SBOLDocument.createComponentDefinition(String displayId,
URI type)
Creates a component definition, and then adds it to this SBOL document's list
of component definitions.
|
ComponentDefinition |
SequenceAnnotation.getComponentDefinition()
Returns the component definition for the component annotated by this sequence annotation.
|
ComponentDefinition |
SBOLDocument.getComponentDefinition(String displayId,
String version)
Returns the component definition matching the given display ID and version
from this SBOL document's list of component definitions.
|
ComponentDefinition |
SBOLDocument.getComponentDefinition(URI componentDefinitionURI)
Returns the component definition matching the given identity URI from this
SBOL document's list of component definitions.
|
ComponentDefinition |
ComponentInstance.getDefinition()
Returns the component definition referenced by this component or functional component.
|
ComponentDefinition |
MapsTo.getLocalDefinition()
Retrieves referenced component definition by this mapsTo's local component instance.
|
ComponentDefinition |
SequenceConstraint.getObjectDefinition()
Returns the component definition that defines the object component of this sequence constraint.
|
ComponentDefinition |
Participation.getParticipantDefinition()
Returns the component definition referenced by this participation's participant.
|
ComponentDefinition |
MapsTo.getRemoteDefinition()
Returns the remote component definition referenced by mapsTo.
|
ComponentDefinition |
SequenceConstraint.getSubjectDefinition()
Returns the component definition that defines the subject component of this sequence constraint.
|
ComponentDefinition |
CombinatorialDerivation.getTemplate()
Returns the component definition referenced by this combinatorial derivation.
|
Modifier and Type | Method and Description |
---|---|
Set<ComponentDefinition> |
SBOLDocument.getComponentDefinitions()
Returns the set of component definitions owned by this SBOL document.
|
Set<ComponentDefinition> |
SBOLDocument.getRootComponentDefinitions()
Returns the set of root component definitions.
|
Set<ComponentDefinition> |
VariableComponent.getVariants()
Returns a set of component definitions belonging to the variable component.
|
Modifier and Type | Method and Description |
---|---|
boolean |
SBOLDocument.removeComponentDefinition(ComponentDefinition componentDefinition)
Removes the given component definition from this SBOL document's list of
component definitions.
|
boolean |
VariableComponent.removeVariant(ComponentDefinition variant)
Removes the given component definition from the list of variants.
|